| 1 | Jaden RosenthalPlace 1 · Grade 10 · High Tech High | 10 | High Tech High | 4:31.75a |
| 2 | Brandon NiegockiPlace 2 · Grade 12 · High Tech High | 12 | High Tech High | 4:39.36a |
| 3 | Max MenkePlace 3 · Grade 11 · High Tech High | 11 | High Tech High | 4:40.34a |
| 4 | Donovan PrincePlace 4 · Grade 10 · High Tech (CV) | 10 | High Tech (CV) | 4:43.53a |
| 5 | Lucas SantiagoPlace 5 · Grade 11 · High Tech High | 11 | High Tech High | 4:46.68a |
| 6 | Josh NunezPlace 6 · Grade 12 · Liberty Charter | 12 | Liberty Charter | 4:47.70a |
| 7 | Josh OrtegaPlace 7 · Grade 12 · High Tech High | 12 | High Tech High | 4:50.10a |
| 8 | Bryan PetersPlace 8 · Grade 12 · High Tech High | 12 | High Tech High | 5:00.92a |
| 9 | Lawrence StarksPlace 9 · Grade 10 · Bonsall | 10 | Bonsall | 5:03.69a |
| 10 | Jack BossPlace 10 · Grade 10 · High Tech High | 10 | High Tech High | 5:03.82a |
| 11 | Emilio Lopez-GalloPlace 11 · Grade 11 · High Tech (CV) | 11 | High Tech (CV) | 5:04.84a |
| 12 | Robby GoebelPlace 12 · Grade 12 · High Tech High | 12 | High Tech High | 5:10.79a |
| 13 | Joshua LombardiPlace 13 · Grade 9 · Health Sciences High... | 9 | Health Sciences High... | 5:13.65a |
| 14 | Alec SarabiaPlace 14 · Grade 10 · High Tech (CV) | 10 | High Tech (CV) | 5:14.54a |
| 15 | Jack MontesanoPlace 15 · Grade 9 · High Tech High | 9 | High Tech High | 5:14.61a |
| 16 | Jacob LopezPlace 16 · Grade 9 · Liberty Charter | 9 | Liberty Charter | 5:17.54a |
| 17 | Stevie MoralesPlace 17 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 5:17.68a |
| 18 | Alex GreenePlace 18 · Grade 10 · Bonsall | 10 | Bonsall | 5:19.74a |
| 19 | Neftali BojorquezPlace 19 · Grade 9 · Gompers Preparatory ... | 9 | Gompers Preparatory ... | 5:24.64a |
| 20 | Tucker GralewskiPlace 20 · Grade 9 · High Tech High | 9 | High Tech High | 5:25.14a |
| 21 | Carter BondPlace 21 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 5:26.06a |
| 22 | Henry WhitelyPlace 22 · Grade 9 · High Tech High | 9 | High Tech High | 5:26.90a |
| 23 | Kristian RosasPlace 23 · Grade 9 · High Tech (CV) | 9 | High Tech (CV) | 5:26.91a |
| 24 | Jon LorenzPlace 24 · Grade 12 · Liberty Charter | 12 | Liberty Charter | 5:29.41a |
| 25 | Ben ParrishPlace 25 · Grade 9 · High Tech High | 9 | High Tech High | 5:30.87a |
| 26 | Nasser MelchorPlace 26 · Grade 9 · High Tech High | 9 | High Tech High | 5:33.49a |
| 27 | Samuel AntonezPlace 27 · Grade 11 · O'Farrell Charter | 11 | O'Farrell Charter | 5:34.46a |
| 28 | Eric IngrandePlace 28 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 5:36.69a |
| 29 | Michael SavalaPlace 29 · Grade 9 · High Tech (CV) | 9 | High Tech (CV) | 5:39.85a |
| 30 | Aaron AaronPlace 30 · Grade 9 · Gompers Preparatory ... | 9 | Gompers Preparatory ... | 5:40.14a |
| 31 | Peerless JohnsonPlace 31 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 5:41.26a |
| 32 | Dylan JouniPlace 32 · Grade 11 · Liberty Charter | 11 | Liberty Charter | 5:44.59a |
| 33 | Kang KangPlace 33 · Grade 12 · O'Farrell Charter | 12 | O'Farrell Charter | 5:44.78a |
| 34 | Peter RochePlace 34 · Grade 10 · High Tech (CV) | 10 | High Tech (CV) | 5:49.22a |
| 35 | Symeon ElkinsPlace 35 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 5:49.60a |
| 36 | Axel MarquezPlace 36 · Grade 9 · Gompers Preparatory ... | 9 | Gompers Preparatory ... | 5:54.72a |
| 37 | Stanton MilesPlace 37 · Grade 9 · High Tech High | 9 | High Tech High | 5:55.06a |
| 38 | Anael PizcalPlace 38 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 5:55.07a |
| 39 | William WallacePlace 39 · Grade 10 · Bonsall | 10 | Bonsall | 5:57.59a |
| 40 | Richie NgoPlace 40 · Grade 12 · High Tech High | 12 | High Tech High | 5:59.49a |
| 41 | Spencer KricfalusiPlace 41 · High Tech High | — | High Tech High | 5:59.95a |
| 42 | Luis AssidPlace 42 · Grade 10 · Monarch | 10 | Monarch | 5:59.96a |
| 43 | Joshua FloresPlace 43 · Grade 10 · Health Sciences High... | 10 | Health Sciences High... | 6:01.35a |
| 44 | Erick MontejoPlace 44 · Grade 9 · Bonsall | 9 | Bonsall | 6:04.10a |
| 45 | Erick RamirezPlace 45 · Grade 9 · Bayfront Charter | 9 | Bayfront Charter | 6:07.83a |
| 46 | Marcos SanchezPlace 46 · Grade 9 · High Tech High | 9 | High Tech High | 6:13.55a |
| 47 | Shawn McKenzie-HeckPlace 47 · Grade 10 · Bonsall | 10 | Bonsall | 6:17.72a |
| 48 | Ellery SanchezPlace 48 · Grade 9 · Health Sciences High... | 9 | Health Sciences High... | 6:24.07a |
| 49 | Roberto GallardoPlace 49 · Grade 10 · O'Farrell Charter | 10 | O'Farrell Charter | 6:25.96a |
| 50 | Liam HashagenPlace 50 · Grade 9 · Liberty Charter | 9 | Liberty Charter | 6:26.95a |
| 51 | David SandovalPlace 51 · Grade 10 · High Tech (CV) | 10 | High Tech (CV) | 6:36.42a |
| 52 | Ho Chun(Payton) HsuPlace 52 · Grade 11 · CCPAA | 11 | CCPAA | 6:54.01a |
| 53 | Abisai MaganaPlace 53 · Grade 10 · Bayfront Charter | 10 | Bayfront Charter | 6:55.11a |
| 1 | Sienna SantiagoPlace 1 · Grade 11 · High Tech High | 11 | High Tech High | 5:17.86a |
| 2 | Rose of Sharon WilsonPlace 2 · Grade 10 · High Tech High | 10 | High Tech High | 5:42.72a |
| 3 | Akacia BrillonPlace 3 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 6:11.97a |
| 4 | Sandra Loya-EstradaPlace 4 · Grade 12 · Chula Vista Learning... | 12 | Chula Vista Learning... | 6:14.42a |
| 5 | Sarina KuninagaPlace 5 · Grade 9 · High Tech (CV) | 9 | High Tech (CV) | 6:19.66a |
| 6 | Juliana MarquezPlace 6 · Grade 9 · Chula Vista Learning... | 9 | Chula Vista Learning... | 6:21.27a |
| 7 | Olivia KakacekPlace 7 · Grade 10 · High Tech High | 10 | High Tech High | 6:26.03a |
| 8 | Indika YoungPlace 8 · Grade 12 · High Tech High | 12 | High Tech High | 6:27.97a |
| 9 | Elena HoffmanPlace 9 · Grade 12 · High Tech High | 12 | High Tech High | 6:41.90a |
| 10 | Bridget BradenPlace 10 · Grade 9 · Liberty Charter | 9 | Liberty Charter | 6:48.61a |
| 11 | Lauren JouniPlace 11 · Grade 11 · Liberty Charter | 11 | Liberty Charter | 6:53.14a |
| 12 | Isabella RehderPlace 12 · Grade 10 · Bonsall | 10 | Bonsall | 6:58.27a |
| 13 | Jessica CabanPlace 13 · Grade 11 · Liberty Charter | 11 | Liberty Charter | 7:19.97a |
| 14 | Molly FaganPlace 14 · Grade 9 · River Valley Charter | 9 | River Valley Charter | 7:30.77a |
| 15 | Lauren NiegockiPlace 15 · Grade 9 · High Tech High | 9 | High Tech High | 7:37.47a |
| 16 | Madison HannPlace 16 · Grade 10 · River Valley Charter | 10 | River Valley Charter | 7:45.72a |
| 17 | Brandy RucoboPlace 17 · Grade 12 · Monarch | 12 | Monarch | 7:51.59a |
| 18 | Teagann NickelPlace 18 · Grade 9 · High Tech (CV) | 9 | High Tech (CV) | 7:51.74a |
| 19 | Allison JouniPlace 19 · Grade 11 · Liberty Charter | 11 | Liberty Charter | 8:02.37a |
| 20 | Leslie MedinaPlace 20 · Grade 9 · Gompers Preparatory ... | 9 | Gompers Preparatory ... | 8:09.51a |
| 21 | Joey HerreraPlace 21 · Grade 9 · River Valley Charter | 9 | River Valley Charter | 8:28.91a |