| 1 | Drake PrincePlace 1 · Grade 11 · High Tech (CV)Unofficial | 11 | High Tech (CV) | 16:50 |
| 2 | Henry WhiteleyPlace 2 · Grade 12 · High Tech High (SD)Unofficial | 12 | High Tech High (SD) | 17:16 |
| 3 | Reed HarrisPlace 3 · Grade 11 · High Tech High (SD)Unofficial | 11 | High Tech High (SD) | 18:04 |
| 4 | David MillerPlace 4 · Grade 12 · Liberty CharterUnofficial | 12 | Liberty Charter | 18:06 |
| 5 | Maximus CollierPlace 5 · Grade 12 · BonsallUnofficial | 12 | Bonsall | 18:08 |
| 6 | Austin AlanisPlace 6 · Grade 11 · BonsallUnofficial | 11 | Bonsall | 18:22 |
| 7 | Ben ParrishPlace 7 · Grade 12 · High Tech High (SD)Unofficial | 12 | High Tech High (SD) | 18:27 |
| 8 | Sebastian CleggPlace 8 · Grade 11 · MonarchUnofficial | 11 | Monarch | 18:33 |
| 9 | Elias DoumercPlace 9 · Grade 11 · Gompers Preparatory AcademyUnofficial | 11 | Gompers Preparatory Academy | 18:51 |
| 10 | Jack MontesanoPlace 10 · Grade 12 · High Tech High (SD)Unofficial | 12 | High Tech High (SD) | 19:05 |
| 11 | Doug Frattini-EdwardsPlace 11 · Grade 9 · High Tech High (SD)Unofficial | 9 | High Tech High (SD) | 19:18 |
| 12 | James CovertPlace 12 · Grade 10 · River Valley CharterUnofficial | 10 | River Valley Charter | 19:29 PR |
| 13 | Cesar Cuevas-JimenezPlace 13 · Grade 12 · O'Farrell CharterUnofficial | 12 | O'Farrell Charter | 19:41 |
| 14 | Owen GautPlace 14 · Grade 11 · Liberty CharterUnofficial | 11 | Liberty Charter | 19:52 |
| 15 | Jacob MapesPlace 15 · Grade 10 · Liberty CharterUnofficial | 10 | Liberty Charter | 20:15 |
| 16 | Evan HardisonPlace 16 · Grade 10 · River Valley CharterUnofficial | 10 | River Valley Charter | 20:24 PR |
| 17 | Abraham CamachoPlace 17 · Grade 11 · Chula Vista Learning CommunityUnofficial | 11 | Chula Vista Learning Community | 20:30 |
| 18 | Abraham SalazarPlace 18 · Grade 12 · The Preuss SchoolUnofficial | 12 | The Preuss School | 20:33 |
| 19 | Caleb GreenfieldPlace 19 · Grade 12 · Liberty CharterUnofficial | 12 | Liberty Charter | 20:34 |
| 20 | Calvin HamiltonPlace 20 · Grade 12 · BonsallUnofficial | 12 | Bonsall | 20:44 |
| 21 | Ethan McFarlandPlace 21 · Grade 9 · BonsallUnofficial | 9 | Bonsall | 20:45 |
| 22 | Gunnar StreichPlace 22 · Grade 12 · BonsallUnofficial | 12 | Bonsall | 20:46 |
| 23 | Rylan PurificacionPlace 23 · Grade 11 · High Tech (CV)Unofficial | 11 | High Tech (CV) | 20:48 |
| 24 | Jude CoppersmithPlace 24 · Grade 10 · Liberty CharterUnofficial | 10 | Liberty Charter | 20:56 |
| 25 | Nicolas De La RosaPlace 25 · Grade 12 · Bayfront CharterUnofficial | 12 | Bayfront Charter | 21:01 |
| 26 | Ethan MaxwellPlace 26 · Grade 10 · Bayfront CharterUnofficial | 10 | Bayfront Charter | 21:04 |
| 27 | Jacob LopezPlace 27 · Grade 12 · Liberty CharterUnofficial | 12 | Liberty Charter | 21:08 |
| 28 | Mostafa EltayebPlace 28 · Grade 11 · High Tech High (SD)Unofficial | 11 | High Tech High (SD) | 21:22 |
| 29 | Christian GomezPlace 29 · Grade 11 · Chula Vista Learning CommunityUnofficial | 11 | Chula Vista Learning Community | 21:25 |
| 30 | Valencio CocoPlace 30 · Grade 9 · High Tech (CV)Unofficial | 9 | High Tech (CV) | 21:30 |
| 31 | Xavier MolinaPlace 31 · Grade 9 · High Tech (CV)Unofficial | 9 | High Tech (CV) | 21:34 |
| 32 | Oscar GalvanPlace 32 · Grade 10 · O'Farrell CharterUnofficial | 10 | O'Farrell Charter | 21:43 |
| 33 | Troy BaconPlace 33 · Grade 11 · O'Farrell CharterUnofficial | 11 | O'Farrell Charter | 21:46 |
| 34 | Angel SerranoPlace 34 · Grade 11 · MonarchUnofficial | 11 | Monarch | 21:47 PR |
| 35 | Matt NicholsonPlace 35 · Grade 11 · River Valley CharterUnofficial | 11 | River Valley Charter | 21:53 |
| 36 | Justin DiProfioPlace 36 · Grade 11 · High Tech High (SD)Unofficial | 11 | High Tech High (SD) | 22:01 |
| 37 | Derek ChastangPlace 37 · Grade 11 · MonarchUnofficial | 11 | Monarch | 22:15 |
| 38 | Derek RoblesPlace 38 · Grade 10 · MonarchUnofficial | 10 | Monarch | 22:16 |
| 39 | Ivan CuevasPlace 39 · Grade 10 · O'Farrell CharterUnofficial | 10 | O'Farrell Charter | 22:20 |
| 40 | Rudy OrosPlace 40 · Grade 11 · Gompers Preparatory AcademyUnofficial | 11 | Gompers Preparatory Academy | 22:22 |
| 41 | Caleb StevensonPlace 41 · Grade 9 · Coastal AcademyUnofficial | 9 | Coastal Academy | 22:50 |
| 42 | Matthew EliasPlace 42 · Grade 9 · Liberty CharterUnofficial | 9 | Liberty Charter | 22:52 |
| 43 | Jackie LePlace 43 · Grade 11 · The Preuss SchoolUnofficial | 11 | The Preuss School | 23:01 PR |
| 44 | Javier RamosPlace 44 · Grade 12 · Liberty CharterUnofficial | 12 | Liberty Charter | 23:04 |
| 45 | Eric MirandaPlace 45 · Grade 11 · High Tech (CV)Unofficial | 11 | High Tech (CV) | 23:24 |
| 46 | Oscar MartinezPlace 46 · Grade 12 · O'Farrell CharterUnofficial | 12 | O'Farrell Charter | 23:34 |
| 47 | Jorge UlloaPlace 47 · Grade 12 · Gompers Preparatory AcademyUnofficial | 12 | Gompers Preparatory Academy | 23:43 |
| 48 | Jesus MendezPlace 48 · Grade 12 · The Preuss SchoolUnofficial | 12 | The Preuss School | 23:46 |
| 49 | Victor AlvarezPlace 49 · Grade 12 · Chula Vista Learning CommunityUnofficial | 12 | Chula Vista Learning Community | 23:48 |
| 50 | Noe VillaPlace 50 · Grade 11 · The Preuss SchoolUnofficial | 11 | The Preuss School | 24:20 |
| 51 | Nico MunizPlace 51 · Grade 12 · Bayfront CharterUnofficial | 12 | Bayfront Charter | 24:25 |
| 52 | David AndresPlace 52 · Grade 10 · MonarchUnofficial | 10 | Monarch | 24:28 |
| 53 | Favian PalaciosPlace 53 · Grade 10 · Gompers Preparatory AcademyUnofficial | 10 | Gompers Preparatory Academy | 25:00 |
| 54 | Noel GonzalezPlace 54 · Grade 9 · The Preuss SchoolUnofficial | 9 | The Preuss School | 25:11 |
| 55 | Jose CarreonPlace 55 · Grade 12 · The Preuss SchoolUnofficial | 12 | The Preuss School | 25:32 |
| 56 | Christian VergaraPlace 56 · Grade 10 · Gompers Preparatory AcademyUnofficial | 10 | Gompers Preparatory Academy | 25:58 |
| 57 | Lavar Watkins 2Place 57 · Grade 12 · O'Farrell CharterUnofficial | 12 | O'Farrell Charter | 26:21 |
| 58 | La Fayette WatkinsPlace 58 · Grade 11 · O'Farrell CharterUnofficial | 11 | O'Farrell Charter | 26:27 PR |
| 59 | Angelito MahonPlace 59 · Grade 10 · Coastal AcademyUnofficial | 10 | Coastal Academy | 26:30 |
| 60 | Edwin NuñezPlace 60 · Grade 10 · MonarchUnofficial | 10 | Monarch | 26:45 |
| 61 | Julien Maxwell-OrnelasPlace 61 · Grade 11 · CCPAAUnofficial | 11 | CCPAA | 26:46 |
| 62 | Robert BlaylockPlace 62 · Grade 10 · River Valley CharterUnofficial | 10 | River Valley Charter | 27:18 |
| 63 | Uriel LopezPlace 63 · Grade 10 · MonarchUnofficial | 10 | Monarch | 27:45 |
| 64 | Isaac RossPlace 64 · Grade 12 · BonsallUnofficial | 12 | Bonsall | 28:03 |
| 66 | Caleb SchanzenbachPlace 66 · Grade 9 · Coastal AcademyUnofficial | 9 | Coastal Academy | 28:31 |
| 67 | Sergius GarciaPlace 67 · Grade 10 · Bayfront Charter | 10 | Bayfront Charter | — |
| 68 | Jordan InsixiengmayPlace 68 · Grade 12 · O'Farrell Charter | 12 | O'Farrell Charter | — |
| 69 | Ryan SyPlace 69 · Grade 10 · O'Farrell Charter | 10 | O'Farrell Charter | — |