| 1 | Henry WhiteleyPlace 1 · Grade 12 · High Tech High (SD) | 12 | High Tech High (SD) | 17:06 |
| 2 | Reed HarrisPlace 2 · Grade 11 · High Tech High (SD) | 11 | High Tech High (SD) | 17:28 |
| 3 | Jack MontesanoPlace 3 · Grade 12 · High Tech High (SD) | 12 | High Tech High (SD) | 17:41 |
| 4 | Max CollierPlace 4 · Grade 12 · Bonsall | 12 | Bonsall | 18:31 |
| 5 | Austin AlanisPlace 5 · Grade 11 · Bonsall | 11 | Bonsall | 18:38 |
| 6 | Elias DoumercPlace 6 · Grade 11 · Gompers Preparatory Academy | 11 | Gompers Preparatory Academy | 18:39 |
| 7 | David MillerPlace 7 · Grade 12 · Liberty Charter | 12 | Liberty Charter | 18:46 |
| 8 | Cesar Cuevas-JimenezPlace 8 · Grade 12 · O'Farrell Charter | 12 | O'Farrell Charter | 19:14 |
| 9 | Doug Frattini-EdwardsPlace 9 · Grade 9 · High Tech High (SD) | 9 | High Tech High (SD) | 19:27 |
| 10 | James CovertPlace 10 · Grade 10 · River Valley Charter | 10 | River Valley Charter | 19:46 |
| 11 | Owen GautPlace 11 · Grade 11 · Liberty Charter | 11 | Liberty Charter | 19:56 |
| 12 | Gunnar StreichPlace 12 · Grade 12 · Bonsall | 12 | Bonsall | 19:57 PR |
| 13 | Jacob MapesPlace 13 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 19:59 |
| 14 | Ryan CruzPlace 14 · Grade 12 · High Tech High NC | 12 | High Tech High NC | 20:01 |
| 15 | Julian CanezPlace 15 · Grade 10 · High Tech High NC | 10 | High Tech High NC | 20:17 |
| 16 | Abraham SalazarPlace 16 · Grade 12 · The Preuss School | 12 | The Preuss School | 20:24 PR |
| 17 | Oliver ScottPlace 17 · Grade 11 · High Tech High NC | 11 | High Tech High NC | 20:27 |
| 18 | Fernando PerezPlace 18 · Grade 11 · Gompers Preparatory Academy | 11 | Gompers Preparatory Academy | 20:28 |
| 19 | Caleb GreenfieldPlace 19 · Grade 12 · Liberty Charter | 12 | Liberty Charter | 20:43 |
| 20 | Evan HardisonPlace 20 · Grade 10 · River Valley Charter | 10 | River Valley Charter | 20:44 |
| 21 | Ethan McFarlandPlace 21 · Grade 9 · Bonsall | 9 | Bonsall | 20:55 |
| 22 | Calvin HamiltonPlace 22 · Grade 12 · Bonsall | 12 | Bonsall | 20:56 |
| 23 | Abraham CamachoPlace 23 · Grade 11 · Chula Vista Learning Community | 11 | Chula Vista Learning Community | 20:56 |
| 24 | Jacob LopezPlace 24 · Grade 12 · Liberty Charter | 12 | Liberty Charter | 21:05 |
| 25 | Johnny PhanPlace 25 · Grade 12 · The Preuss School | 12 | The Preuss School | 21:17 |
| 26 | John HaganPlace 26 · Grade 10 · High Tech High (SD) | 10 | High Tech High (SD) | 21:17 |
| 27 | Derek RoblesPlace 27 · Grade 10 · Monarch | 10 | Monarch | 21:34 PR |
| 28 | Raphi ShpitalnikPlace 28 · Grade 12 · SC Yeshiva | 12 | SC Yeshiva | 21:48 |
| 29 | Jude CoppersmithPlace 29 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 21:55 |
| 30 | Ivan CuevasPlace 30 · Grade 10 · O'Farrell Charter | 10 | O'Farrell Charter | 22:05 |
| 31 | Caleb StevensonPlace 31 · Grade 9 · Coastal Academy | 9 | Coastal Academy | 22:06 |
| 32 | Troy BaconPlace 32 · Grade 11 · O'Farrell Charter | 11 | O'Farrell Charter | 22:15 |
| 33 | Nick MurphyPlace 33 · Grade 11 · Bonsall | 11 | Bonsall | 22:19 |
| 34 | Jorge UlloaPlace 34 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 22:21 |
| 35 | Matt NicholsonPlace 35 · Grade 11 · River Valley Charter | 11 | River Valley Charter | 22:39 |
| 36 | Derek ChastangPlace 36 · Grade 11 · Monarch | 11 | Monarch | 23:00 |
| 37 | Matthew EliasPlace 37 · Grade 9 · Liberty Charter | 9 | Liberty Charter | 23:09 |
| 38 | Victor AlvarezPlace 38 · Grade 12 · Chula Vista Learning Community | 12 | Chula Vista Learning Community | 23:14 |
| 39 | Oscar GalvanPlace 39 · Grade 10 · O'Farrell Charter | 10 | O'Farrell Charter | 23:26 |
| 40 | Marcus O'neillPlace 40 · Grade 9 · Cambridge | 9 | Cambridge | 23:35 |
| 41 | Jesus MendezPlace 41 · Grade 12 · The Preuss School | 12 | The Preuss School | 23:40 |
| 42 | Oscar MartinezPlace 42 · Grade 12 · O'Farrell Charter | 12 | O'Farrell Charter | 24:04 |
| 43 | Fernando RamirezPlace 43 · Grade 11 · High Tech High NC | 11 | High Tech High NC | 24:28 |
| 44 | Michael BrionesPlace 44 · Grade 9 · The Preuss School | 9 | The Preuss School | 24:29 |
| 45 | Jackson WelshPlace 45 · Grade 12 · High Tech High NC | 12 | High Tech High NC | 24:53 |
| 46 | Christian GomezPlace 46 · Grade 11 · Chula Vista Learning Community | 11 | Chula Vista Learning Community | 25:00 |
| 47 | Harrison WechslerPlace 47 · Grade 10 · SC Yeshiva | 10 | SC Yeshiva | 25:07 |
| 48 | Jimmy FangPlace 48 · Grade 9 · Cambridge | 9 | Cambridge | 25:08 PR |
| 49 | Alan MadridPlace 49 · Grade 11 · The Preuss School | 11 | The Preuss School | 25:15 |
| 50 | Favian PalaciosPlace 50 · Grade 10 · Gompers Preparatory Academy | 10 | Gompers Preparatory Academy | 26:01 |
| 51 | Uriel LopezPlace 51 · Grade 10 · Monarch | 10 | Monarch | 27:45 |
| 52 | Caleb SchanzenbachPlace 52 · Grade 9 · Coastal Academy | 9 | Coastal Academy | 27:48 |
| 53 | Griffin TompkinsPlace 53 · Grade 12 · High Tech High NC | 12 | High Tech High NC | 28:19 |
| 54 | Amitai HaimPlace 54 · Grade 11 · SC Yeshiva | 11 | SC Yeshiva | 28:22 |
| 55 | David RockPlace 55 · Grade 9 · SC Yeshiva | 9 | SC Yeshiva | 28:35 |
| 56 | Stephen PriestPlace 56 · Grade 11 · Cambridge | 11 | Cambridge | 28:36 |
| 57 | Christan GarciaPlace 57 · Grade 11 · Coastal Academy | 11 | Coastal Academy | 28:38 |
| 58 | Angelito MahonPlace 58 · Grade 10 · Coastal Academy | 10 | Coastal Academy | 28:56 |
| 59 | Kastill GarciaPlace 59 · Grade 10 · Coastal Academy | 10 | Coastal Academy | 29:00 |
| 60 | Yehuda PaleyPlace 60 · Grade 12 · SC Yeshiva | 12 | SC Yeshiva | 29:01 |
| 61 | Tzvi AdattoPlace 61 · Grade 9 · SC Yeshiva | 9 | SC Yeshiva | 29:14 |
| 62 | Noam GoldmanPlace 62 · Grade 9 · SC Yeshiva | 9 | SC Yeshiva | 29:36 |
| 63 | Yekusiel PaleyPlace 63 · Grade 10 · SC Yeshiva | 10 | SC Yeshiva | 30:43 |
| 64 | Jordan InsixiengmayPlace 64 · Grade 12 · O'Farrell Charter | 12 | O'Farrell Charter | 30:55 |
| 65 | David LappPlace 65 · Grade 12 · SC Yeshiva | 12 | SC Yeshiva | 31:50 |