| 1 | Sam RohrerPlace 1 · Grade 11 · Liberty Charter | 11 | Liberty Charter | 16:34.80 |
| 2 | Caleb AcostaPlace 2 · Grade 12 · Liberty Charter | 12 | Liberty Charter | 16:35.30 |
| 3 | Elijah GibbonsPlace 3 · Grade 12 · High Tech High NC | 12 | High Tech High NC | 17:36.30 |
| 4 | Miguel JuradoPlace 4 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 17:38.70 |
| 5 | Remington CampbellPlace 5 · Grade 11 · High Tech High NC | 11 | High Tech High NC | 17:55.00 |
| 6 | Esteban Hernandez-CervaPlace 6 · Grade 11 · High Tech (CV) | 11 | High Tech (CV) | 18:00.50 |
| 7 | Ethan AcostaPlace 7 · Grade 11 · Liberty Charter | 11 | Liberty Charter | 18:18.10 |
| 8 | Evan EdmondsPlace 8 · Grade 12 · Cambridge | 12 | Cambridge | 18:52.60 |
| 9 | Josiah SvendsenPlace 9 · Grade 11 · Liberty Charter | 11 | Liberty Charter | 18:56.30 |
| 10 | Jonathan ScottPlace 10 · Grade 12 · Liberty Charter | 12 | Liberty Charter | 19:08.10 |
| 11 | Roman VidovichPlace 11 · Grade 11 · Bayfront Charter | 11 | Bayfront Charter | 19:08.40 |
| 12 | Santiago CarrenoPlace 12 · Grade 9 · Chula Vista Learning Community | 9 | Chula Vista Learning Community | 19:10.90 |
| 13 | Grant FormanPlace 13 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 19:19.40 |
| 14 | Caleb RodriguezPlace 14 · Grade 10 · Liberty Charter | 10 | Liberty Charter | 19:20.40 |
| 15 | Marco AndradePlace 15 · Grade 12 · Bayfront Charter | 12 | Bayfront Charter | 19:20.70 |
| 16 | Tenzin KuhlPlace 16 · Grade 10 · High Tech High Mesa | 10 | High Tech High Mesa | 19:40.00 |
| 17 | Quartz LiuPlace 17 · Grade 9 · Cambridge | 9 | Cambridge | 19:45.60 |
| 18 | Myca ChareunsriPlace 18 · Grade 10 · School for Entrepreneurship and Techno | 10 | School for Entrepreneurship and Techno | 19:47.90 |
| 19 | Kai RandallPlace 19 · Grade 11 · High Tech High NC | 11 | High Tech High NC | 19:49.20 |
| 20 | Joshua MaganaPlace 20 · Grade 11 · Cristo Rey (San Diego) | 11 | Cristo Rey (San Diego) | 19:49.70 |
| 21 | Jasper CluggishPlace 21 · Grade 10 · School for Entrepreneurship and Techno | 10 | School for Entrepreneurship and Techno | 19:57.60 |
| 22 | Gabriel VenegasPlace 22 · Grade 10 · High Tech High Mesa | 10 | High Tech High Mesa | 20:04.70 |
| 23 | Edward BrayPlace 23 · Grade 10 · Bonsall | 10 | Bonsall | 20:08.60 |
| 24 | Angel GonzalezPlace 24 · Grade 11 · Chula Vista Learning Community | 11 | Chula Vista Learning Community | 20:10.50 |
| 25 | Warren SevillePlace 25 · Grade 9 · Cambridge | 9 | Cambridge | 20:13.00 |
| 26 | Andric WenPlace 26 · Grade 9 · Cambridge | 9 | Cambridge | 20:19.00 |
| 27 | Natal WoldeyesusPlace 27 · Grade 11 · O'Farrell Charter | 11 | O'Farrell Charter | 20:23.70 |
| 28 | Ryan MonacoPlace 28 · Grade 10 · High Tech High NC | 10 | High Tech High NC | 20:26.10 |
| 29 | Nathan LeePlace 29 · Grade 9 · Cambridge | 9 | Cambridge | 20:27.40 |
| 30 | Rolando CurottoPlace 30 · Grade 12 · Chula Vista Learning Community | 12 | Chula Vista Learning Community | 20:28.40 |
| 31 | Derek WenPlace 31 · Grade 9 · Cambridge | 9 | Cambridge | 20:29.00 |
| 32 | Christopher MejiaPlace 32 · Grade 10 · Monarch | 10 | Monarch | 20:30.50 |
| 33 | Tucker SheltonPlace 33 · Grade 10 · High Tech High NC | 10 | High Tech High NC | 20:31.20 |
| 34 | Toby VinjePlace 34 · Grade 9 · High Tech High Mesa | 9 | High Tech High Mesa | 20:31.90 |
| 35 | Michael TalaroPlace 35 · Grade 12 · High Tech (CV) | 12 | High Tech (CV) | 20:35.90 |
| 36 | Roy GonzalezPlace 36 · Grade 11 · Cristo Rey (San Diego) | 11 | Cristo Rey (San Diego) | 20:36.20 |
| 37 | Yakob GharoyPlace 37 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 20:46.70 |
| 38 | Julian GutierrezPlace 38 · Grade 11 · Chula Vista Learning Community | 11 | Chula Vista Learning Community | 20:52.20 |
| 39 | Ossmar RodriguezPlace 39 · Grade 9 · Chula Vista Learning Community | 9 | Chula Vista Learning Community | 20:55.50 |
| 40 | Noah Andrade-FoxwellPlace 40 · Grade 10 · High Tech High Mesa | 10 | High Tech High Mesa | 20:58.30 |
| 41 | Tyler JohnsonPlace 41 · Grade 11 · O'Farrell Charter | 11 | O'Farrell Charter | 20:58.30 |
| 42 | Logan BuessPlace 42 · Grade 12 · High Tech High Mesa | 12 | High Tech High Mesa | 21:02.60 |
| 43 | Jahn EnriquezPlace 43 · Grade 11 · Mountain Empire | 11 | Mountain Empire | 21:03.80 |
| 44 | Aaron DonePlace 44 · Grade 9 · High Tech High Mesa | 9 | High Tech High Mesa | 21:14.80 |
| 45 | Eric ReidPlace 45 · Grade 9 · Monarch | 9 | Monarch | 21:18.50 |
| 46 | Israel MorroyPlace 46 · Grade 10 · High Tech (CV) | 10 | High Tech (CV) | 21:21.80 |
| 47 | Edward ContrerasPlace 47 · Grade 10 · High Tech (CV) | 10 | High Tech (CV) | 21:23.70 |
| 48 | Soren GlomsrudPlace 48 · Grade 9 · Cambridge | 9 | Cambridge | 21:26.10 |
| 49 | Eric MartinezPlace 49 · Grade 11 · High Tech High NC | 11 | High Tech High NC | 21:32.30 |
| 50 | Jesus LopezPlace 50 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 21:33.20 |
| 51 | Angel LopezPlace 51 · Grade 9 · Gompers Preparatory Academy | 9 | Gompers Preparatory Academy | 21:39.00 |
| 52 | Sebastian GodinezPlace 52 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 21:44.90 |
| 53 | Bryan SchultzPlace 53 · Grade 12 · School for Entrepreneurship and Techno | 12 | School for Entrepreneurship and Techno | 21:50.00 |
| 54 | Kevin GarciaPlace 54 · Grade 10 · Gompers Preparatory Academy | 10 | Gompers Preparatory Academy | 22:09.20 |
| 55 | Oswaldo LopezPlace 55 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 22:19.30 |
| 56 | Emmanuel RodriguezPlace 56 · Grade 9 · Chula Vista Learning Community | 9 | Chula Vista Learning Community | 22:23.80 |
| 57 | Noah Wisniew-KygarPlace 57 · Grade 11 · Mountain Empire | 11 | Mountain Empire | 22:27.00 |
| 58 | Andre RomeroPlace 58 · Grade 9 · Chula Vista Learning Community | 9 | Chula Vista Learning Community | 22:31.00 |
| 59 | Ryan MorrisonPlace 59 · Grade 10 · High Tech (CV) | 10 | High Tech (CV) | 22:41.40 |
| 60 | Maite BaldosanoPlace 60 · Grade 12 · School for Entrepreneurship and Techno | 12 | School for Entrepreneurship and Techno | 22:47.00 |
| 61 | Ammiel SimonPlace 61 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 22:47.10 |
| 62 | Omar GaxiolaPlace 62 · Grade 12 · Chula Vista Learning Community | 12 | Chula Vista Learning Community | 22:54.50 |
| 63 | Jorge GonzalezPlace 63 · Grade 11 · Cristo Rey (San Diego) | 11 | Cristo Rey (San Diego) | 22:54.90 |
| 64 | Mateo MarquezPlace 64 · Grade 11 · Chula Vista Learning Community | 11 | Chula Vista Learning Community | 22:57.10 |
| 65 | Emiliano OrtegaPlace 65 · Grade 11 · Chula Vista Learning Community | 11 | Chula Vista Learning Community | 23:21.80 |
| 66 | Jesus HernandezPlace 66 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 23:23.10 |
| 67 | Jack HondaPlace 67 · Grade 9 · School for Entrepreneurship and Techno | 9 | School for Entrepreneurship and Techno | 23:23.20 |
| 68 | Levi CrosthwaitePlace 68 · Grade 12 · Chula Vista Learning Community | 12 | Chula Vista Learning Community | 23:28.30 |
| 69 | Anthony MeredithPlace 69 · Grade 11 · School for Entrepreneurship and Techno | 11 | School for Entrepreneurship and Techno | 23:32.20 |
| 70 | Robert LewisPlace 70 · Grade 12 · School for Entrepreneurship and Techno | 12 | School for Entrepreneurship and Techno | 23:40.70 |
| 71 | Carlos SolisPlace 71 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 24:03.30 |
| 72 | Ryder McGuirePlace 72 · Grade 10 · High Tech High NC | 10 | High Tech High NC | 24:17.30 |
| 73 | Enzo OcioPlace 73 · Grade 9 · School for Entrepreneurship and Techno | 9 | School for Entrepreneurship and Techno | 24:28.70 |
| 74 | Diego MontenegroPlace 74 · Grade 12 · Gompers Preparatory Academy | 12 | Gompers Preparatory Academy | 24:35.80 |
| 75 | Luis MonarrezPlace 75 · Grade 10 · Gompers Preparatory Academy | 10 | Gompers Preparatory Academy | 24:50.00 |
| 76 | Jorge AbarcaPlace 76 · Grade 10 · Gompers Preparatory Academy | 10 | Gompers Preparatory Academy | 26:03.90 |
| 77 | Eric LopezPlace 77 · Grade 11 · Bayfront Charter | 11 | Bayfront Charter | 26:05.70 |
| 78 | Jose ParraPlace 78 · Grade 12 · Cristo Rey (San Diego) | 12 | Cristo Rey (San Diego) | 26:38.20 |
| 79 | William WeissPlace 79 · Grade 12 · High Tech High Mesa | 12 | High Tech High Mesa | 26:48.00 |
| 80 | Gavin FosbergPlace 80 · Grade 10 · School for Entrepreneurship and Techno | 10 | School for Entrepreneurship and Techno | 26:49.40 |
| 81 | Elijah MulgadoPlace 81 · Grade 11 · School for Entrepreneurship and Techno | 11 | School for Entrepreneurship and Techno | 26:55.90 |
| 82 | Ryder NguyenPlace 82 · Grade 10 · School for Entrepreneurship and Techno | 10 | School for Entrepreneurship and Techno | 27:02.90 |
| 83 | Carson MorinPlace 83 · Grade 11 · School for Entrepreneurship and Techno | 11 | School for Entrepreneurship and Techno | 27:26.10 |
| 84 | Sebastian FoltaPlace 84 · Grade 9 · School for Entrepreneurship and Techno | 9 | School for Entrepreneurship and Techno | 27:33.80 |
| 85 | Luis Soto GuzmanPlace 85 · Grade 11 · Monarch | 11 | Monarch | 27:52.50 |
| 86 | Charles RomeroPlace 86 · Grade 12 · Bayfront Charter | 12 | Bayfront Charter | 41:44.00 |