| 1 | Aaron ChenPlace 1 · Grade 10 · Mission Bay | 10 | Mission Bay | 17:58.30 PR |
| 2 | Julio MagdalenoPlace 2 · Grade 10 · Hoover (SD) | 10 | Hoover (SD) | 18:08.20 |
| 3 | Jonathan CruzPlace 3 · Grade 10 · Hoover (SD) | 10 | Hoover (SD) | 18:08.80 PR |
| 4 | Oden GuerinPlace 4 · Grade 11 · Hoover (SD) | 11 | Hoover (SD) | 18:42.90 |
| 5 | Asher NankivelPlace 5 · Grade 11 · Canyon Hills | 11 | Canyon Hills | 18:43.60 PR |
| 6 | Adrian PintoPlace 6 · Grade 9 · Hoover (SD) | 9 | Hoover (SD) | 18:46.10 PR |
| 7 | Dante GarciaPlace 7 · Grade 10 · Morse | 10 | Morse | 18:54.60 PR |
| 8 | Max WestwoodPlace 8 · Grade 10 · Mission Bay | 10 | Mission Bay | 18:58.40 |
| 9 | Jonah HoltPlace 9 · Grade 10 · Clairemont | 10 | Clairemont | 19:00.90 PR |
| 10 | Jackson McCabePlace 10 · Grade 10 · Madison | 10 | Madison | 19:21.30 |
| 11 | Elian Briceno-MahrPlace 11 · Grade 10 · Mission Bay | 10 | Mission Bay | 19:24.70 |
| 12 | Finn MeliaPlace 12 · Grade 10 · Mission Bay | 10 | Mission Bay | 19:30.00 PR |
| 13 | Ethan KahanPlace 13 · Grade 11 · Clairemont | 11 | Clairemont | 19:33.80 PR |
| 14 | Ethan WolfskillPlace 14 · Grade 10 · Canyon Hills | 10 | Canyon Hills | 19:35.00 |
| 15 | Rowan WilsonPlace 15 · Grade 9 · Mission Bay | 9 | Mission Bay | 19:36.00 PR |
| 16 | Travis FreyPlace 16 · Grade 10 · Canyon Hills | 10 | Canyon Hills | 19:38.70 PR |
| 17 | Jay KellerPlace 17 · Grade 10 · Clairemont | 10 | Clairemont | 19:49.30 |
| 18 | Noah NavarroPlace 18 · Grade 9 · Lincoln | 9 | Lincoln | 19:49.50 PR |
| 19 | Jesus HuertaPlace 19 · Grade 10 · Hoover (SD) | 10 | Hoover (SD) | 19:50.30 PR |
| 20 | Patrick GallagherPlace 20 · Grade 11 · Mission Bay | 11 | Mission Bay | 19:50.60 |
| 21 | Luis MujicaPlace 21 · Grade 11 · Lincoln | 11 | Lincoln | 19:51.10 PR |
| 22 | Andrew SpagatPlace 22 · Grade 12 · Mission Bay | 12 | Mission Bay | 20:00.90 |
| 23 | Trey RongleyPlace 23 · Grade 9 · Canyon Hills | 9 | Canyon Hills | 20:10.70 |
| 24 | Khianne NguyenPlace 24 · Grade 10 · Hoover (SD) | 10 | Hoover (SD) | 20:12.00 PR |
| 25 | Dante CadenaPlace 25 · Grade 11 · Kearny | 11 | Kearny | 20:13.80 |
| 26 | Dylan BrockPlace 26 · Grade 10 · Mission Bay | 10 | Mission Bay | 20:14.30 PR |
| 27 | Tyson De SotoPlace 27 · Grade 12 · Canyon Hills | 12 | Canyon Hills | 20:15.10 |
| 28 | Bradley MancusoPlace 28 · Grade 9 · Canyon Hills | 9 | Canyon Hills | 20:19.70 PR |
| 29 | David NarvaezPlace 29 · Grade 11 · Hoover (SD) | 11 | Hoover (SD) | 20:23.20 |
| 30 | Pablo ValenciaPlace 30 · Grade 11 · Hoover (SD) | 11 | Hoover (SD) | 20:25.70 |
| 31 | Kai HillerPlace 31 · Grade 12 · Mission Bay | 12 | Mission Bay | 20:27.90 |
| 32 | Paul HernandezPlace 32 · Grade 9 · Canyon Hills | 9 | Canyon Hills | 20:27.90 |
| 33 | Arthur CapronPlace 33 · Grade 9 · Mission Bay | 9 | Mission Bay | 20:37.20 PR |
| 34 | Alec CanalPlace 34 · Grade 9 · Mission Bay | 9 | Mission Bay | 20:42.60 |
| 35 | Isaac GarciaPlace 35 · Grade 12 · Canyon Hills | 12 | Canyon Hills | 20:54.50 |
| 36 | Quinn McLoughlinPlace 36 · Grade 10 · Clairemont | 10 | Clairemont | 20:54.90 PR |
| 37 | Anthony ValdezPlace 37 · Grade 11 · Madison | 11 | Madison | 20:56.90 PR |
| 38 | Victor AcevedoPlace 38 · Grade 11 · Morse | 11 | Morse | 20:58.10 |
| 39 | Jacob BementPlace 39 · Grade 12 · Christian | 12 | Christian | 21:01.30 |
| 40 | Sawyer BafficoPlace 40 · Grade 10 · Clairemont | 10 | Clairemont | 21:01.30 |
| 41 | Francisco GonzalezPlace 41 · Grade 11 · Kearny | 11 | Kearny | 21:03.20 PR |
| 42 | Dawson DailPlace 42 · Grade 10 · Mission Bay | 10 | Mission Bay | 21:08.90 PR |
| 43 | James ThomasPlace 43 · Grade 10 · Morse | 10 | Morse | 21:14.10 PR |
| 44 | Liam WilsonPlace 44 · Grade 9 · Mission Bay | 9 | Mission Bay | 21:23.20 PR |
| 45 | Chrisner JosephPlace 45 · Grade 12 · Lincoln | 12 | Lincoln | 21:27.70 |
| 46 | Malakai BrightPlace 46 · Grade 9 · Christian | 9 | Christian | 21:27.70 |
| 47 | Jace LeonardPlace 47 · Grade 9 · Madison | 9 | Madison | 21:30.60 PR |
| 48 | Michael PearcePlace 48 · Grade 9 · Mission Bay | 9 | Mission Bay | 21:41.30 PR |
| 49 | Elias HernandezPlace 49 · Grade 11 · Canyon Hills | 11 | Canyon Hills | 21:43.60 |
| 50 | Pedro BussandriPlace 50 · Grade 11 · Mission Bay | 11 | Mission Bay | 21:49.30 PR |
| 51 | Alexander TaylorPlace 51 · Grade 9 · Mission Bay | 9 | Mission Bay | 21:57.70 PR |
| 52 | Rowan HoPlace 52 · Grade 9 · Mission Bay | 9 | Mission Bay | 21:59.70 |
| 53 | David VaughanPlace 53 · Grade 9 · Mission Bay | 9 | Mission Bay | 22:00.00 PR |
| 54 | Harley SheffieldPlace 54 · Grade 9 · Mission Bay | 9 | Mission Bay | 22:00.40 PR |
| 55 | Miller SautterPlace 55 · Grade 9 · Canyon Hills | 9 | Canyon Hills | 22:04.20 |
| 56 | Kyle JohnstonPlace 56 · Grade 10 · Canyon Hills | 10 | Canyon Hills | 22:10.30 |
| 57 | Tristan Ebinger-SmithPlace 57 · Grade 11 · Canyon Hills | 11 | Canyon Hills | 22:23.60 |
| 58 | Wyatt MunstermanPlace 58 · Grade 9 · Canyon Hills | 9 | Canyon Hills | 22:24.00 |
| 59 | Kura YukawaPlace 59 · Grade 9 · Madison | 9 | Madison | 22:27.00 |
| 60 | Mauricio ContrerasPlace 60 · Grade 10 · Hoover (SD) | 10 | Hoover (SD) | 22:27.00 |
| 61 | Kevin LopezPlace 61 · Grade 10 · Hoover (SD) | 10 | Hoover (SD) | 22:32.30 |
| 62 | Richard TranPlace 62 · Grade 11 · Hoover (SD) | 11 | Hoover (SD) | 22:33.40 |
| 63 | Daniel McCartyPlace 63 · Grade 10 · Canyon Hills | 10 | Canyon Hills | 22:34.20 |
| 64 | Sammy ZavalaPlace 64 · Grade 12 · Hoover (SD) | 12 | Hoover (SD) | 22:35.30 PR |
| 65 | Zaid Iniguez ZazuetaPlace 65 · Grade 9 · Mission Bay | 9 | Mission Bay | 22:35.30 |
| 66 | Joseph FloresPlace 66 · Grade 11 · Mission Bay | 11 | Mission Bay | 22:41.10 |
| 67 | Matheson BearPlace 67 · Grade 12 · Canyon Hills | 12 | Canyon Hills | 22:41.20 |
| 68 | Jayden RosalesPlace 68 · Grade 11 · Hoover (SD) | 11 | Hoover (SD) | 22:50.10 |
| 69 | Logan KrepsPlace 69 · Grade 10 · Clairemont | 10 | Clairemont | 22:53.20 |
| 70 | Noah ValdezPlace 70 · Grade 12 · Canyon Hills | 12 | Canyon Hills | 23:15.80 |
| 71 | Gregory BrownPlace 71 · Grade 11 · Morse | 11 | Morse | 23:16.30 |
| 72 | Walter MitchellPlace 72 · Grade 9 · Mission Bay | 9 | Mission Bay | 23:34.70 PR |
| 73 | Jorge Paez ChinPlace 73 · Grade 9 · Mission Bay | 9 | Mission Bay | 23:35.40 |
| 74 | Andrew LutzPlace 74 · Grade 9 · Mission Bay | 9 | Mission Bay | 23:47.80 |
| 75 | Quinn Penstone-SmithPlace 75 · Grade 11 · Canyon Hills | 11 | Canyon Hills | 23:48.10 |
| 76 | Bennett GonzalezPlace 76 · Grade 9 · Mission Bay | 9 | Mission Bay | 23:49.50 |
| 77 | Pablo TagabanPlace 77 · Grade 9 · Madison | 9 | Madison | 24:01.50 PR |
| 78 | David GriffinPlace 78 · Grade 12 · Christian | 12 | Christian | 24:10.00 |
| 79 | Vidal ZavalaPlace 79 · Grade 12 · Lincoln | 12 | Lincoln | 24:17.10 PR |
| 80 | Edinael LopezPlace 80 · Grade 9 · Lincoln | 9 | Lincoln | 24:18.40 PR |
| 81 | Aiden ColynPlace 81 · Grade 11 · Canyon Hills | 11 | Canyon Hills | 24:19.00 |
| 82 | Benjamin LowPlace 82 · Grade 10 · Madison | 10 | Madison | 24:19.80 PR |
| 83 | Nathan CoscoPlace 83 · Grade 10 · Canyon Hills | 10 | Canyon Hills | 24:20.40 PR |
| 84 | Isaac MarquezPlace 84 · Grade 12 · Logan Memorial Educational Campus | 12 | Logan Memorial Educational Campus | 24:32.40 PR |
| 85 | Isaac TorresPlace 85 · Grade 10 · Lincoln | 10 | Lincoln | 25:02.80 |
| 86 | Sixten Martensson-BarbasPlace 86 · Grade 10 · Mission Bay | 10 | Mission Bay | 25:27.90 |
| 87 | Albert YamadaPlace 87 · Grade 12 · Clairemont | 12 | Clairemont | 25:34.70 |
| 88 | Robert BaumgardnerPlace 88 · Grade 9 · Madison | 9 | Madison | 26:19.10 |
| 89 | Logan NashPlace 89 · Grade 10 · Canyon Hills | 10 | Canyon Hills | 26:25.80 |
| 90 | Jules Martinez-VlaudPlace 90 · Grade 10 · Mission Bay | 10 | Mission Bay | 26:45.90 |
| 91 | Alistair VancePlace 91 · Grade 9 · Mission Bay | 9 | Mission Bay | 26:46.70 |
| 92 | Eric PavonPlace 92 · Grade 9 · Canyon Hills | 9 | Canyon Hills | 26:56.60 |
| 93 | Tristian LeonardPlace 93 · Grade 9 · Kearny | 9 | Kearny | 27:40.10 |
| 94 | Lucas HulbertPlace 94 · Grade 10 · Clairemont | 10 | Clairemont | 27:45.40 |
| 95 | Logan PavonPlace 95 · Grade 9 · Canyon Hills | 9 | Canyon Hills | 29:17.80 |
| 96 | David Lopez GutierrezPlace 96 · Grade 11 · Madison | 11 | Madison | 29:28.60 |
| 97 | Luke HunterPlace 97 · Grade 9 · Morse | 9 | Morse | 32:12.00 PR |
| 98 | Steven NguyenPlace 98 · Grade 10 · Kearny | 10 | Kearny | 32:16.90 |
| 99 | Emanuel AlcantarGonzalezPlace 99 · Grade 11 · Kearny | 11 | Kearny | 32:17.50 PR |
