| 1 | Tom GruenewaldPlace 1 · Fayetteville-Manlius | — | Fayetteville-Manlius | 12:41.90 |
| 2 | Owen KimplePlace 2 · Fayetteville-Manlius | — | Fayetteville-Manlius | 12:48.40 |
| 3 | Jarred BurdickPlace 3 · Fayetteville-Manlius | — | Fayetteville-Manlius | 12:49.50 |
| 4 | John HeronPlace 4 · Fayetteville-Manlius | — | Fayetteville-Manlius | 12:50.70 |
| 5 | Andy McCannPlace 5 · Fayetteville-Manlius | — | Fayetteville-Manlius | 12:53.20 |
| 6 | Chris HorelPlace 6 · CBA (NJ) | — | CBA (NJ) | 12:58.80 |
| 7 | Sean McGinleyPlace 7 · LaSalle (PA) | — | LaSalle (PA) | 13:06.20 |
| 8 | Greg LeachPlace 8 · CBA (NJ) | — | CBA (NJ) | 13:16.80 |
| 9 | Jay KoloseurPlace 9 · Guilford | — | Guilford | 13:19.90 |
| 10 | Kevin RogersPlace 10 · CBA (NJ) | — | CBA (NJ) | 13:22.70 |
| 12 | Justin WheatPlace 12 · CBA (NJ) | — | CBA (NJ) | 13:27.80 |
| 13 | Mark AmiraultPlace 13 · Xaverian (MA) | — | Xaverian (MA) | 13:30.90 |
| 14 | Pat HessPlace 14 · Bishop McDevitt | — | Bishop McDevitt | 13:31.40 |
| 15 | Alec BledayPlace 15 · Xaverian (MA) | — | Xaverian (MA) | 13:33.30 |
| 16 | Steve DurhamPlace 16 · Guilford | — | Guilford | 13:35.20 |
| 17 | Jim PhelanPlace 17 · Guilford | — | Guilford | 13:36.20 |
| 18 | Anthony PellegrinoPlace 18 · CBA (NJ) | — | CBA (NJ) | 13:37.10 |
| 19 | Ben KulpPlace 19 · Amherst Reg | — | Amherst Reg | 13:37.80 |
| 20 | Pat JeffersPlace 20 · LaSalle (PA) | — | LaSalle (PA) | 13:38.00 |
| 21 | Bob McCulloughPlace 21 · LaSalle (PA) | — | LaSalle (PA) | 13:38.20 |
| 22 | Joel Frost-TiftPlace 22 · Averill Park | — | Averill Park | 13:38.40 |
| 23 | Brian KeatingPlace 23 · CBA (NJ) | — | CBA (NJ) | 13:42.00 |
| 24 | Chris LockePlace 24 · Guilford | — | Guilford | 13:43.50 |
| 25 | Scott DickoverPlace 25 · Middle Town (NY) | — | Middle Town (NY) | 13:45.90 |
| 26 | Tim SheaPlace 26 · LaSalle (PA) | — | LaSalle (PA) | 13:46.20 |
| 27 | Jeoff KingPlace 27 · Fayetteville-Manlius | — | Fayetteville-Manlius | 13:47.00 |
| 28 | Tim DurhamPlace 28 · Guilford | — | Guilford | 13:48.90 |
| 30 | Tim HeckPlace 30 · LaSalle (PA) | — | LaSalle (PA) | 13:49.50 |
| 31 | Ryan HurtPlace 31 · Amherst Reg | — | Amherst Reg | 13:50.90 |
| 32 | Tom CareyPlace 32 · Cornwall | — | Cornwall | 13:51.20 |
| 33 | Nick GrassomPlace 33 · Mohonasen | — | Mohonasen | 13:51.80 |
| 34 | Keith FlandersPlace 34 · Westford Acad | — | Westford Acad | 13:52.60 |
| 35 | Brandon MadiganPlace 35 · Scotia-Glenville | — | Scotia-Glenville | 13:53.00 |
| 36 | Dan RenahanPlace 36 · Middle Country | — | Middle Country | 13:53.20 |
| 37 | Matt DahlPlace 37 · Raritan | — | Raritan | 13:54.00 |
| 38 | John PynePlace 38 · Bishop McDevitt | — | Bishop McDevitt | 13:55.10 |
| 39 | Rafael OrtizPlace 39 · Spring Valley | — | Spring Valley | 13:55.30 |
| 40 | Andrew MoskevitzPlace 40 · BFA | — | BFA | 13:55.60 |
| 41 | Dan HigginsPlace 41 · Xaverian MA | — | Xaverian MA | 14:01.00 |
| 42 | Ryan AndersonPlace 42 · Orchard Park | — | Orchard Park | 14:02.10 |
| 43 | Robert CareyPlace 43 · Nottingham | — | Nottingham | 14:05.50 |
| 44 | James AlexanderPlace 44 · Pearl River | — | Pearl River | 14:05.90 |
| 45 | Dan MurtaghPlace 45 · Xavier | — | Xavier | 14:06.10 |
| 46 | Mike MauroPlace 46 · Nottingham | — | Nottingham | 14:06.30 |
| 47 | Tim WhitePlace 47 · Scotia-Glenville | — | Scotia-Glenville | 14:07.80 |
| 48 | freddy SalomanPlace 48 · SS Seward | — | SS Seward | 14:08.60 |
| 50 | Mark DelPradoPlace 50 · Mohonasen | — | Mohonasen | 14:09.60 |
| 51 | Ed BonneviePlace 51 · LaSalle PA | — | LaSalle PA | 14:10.10 |
| 82 | Brian BayPlace 82 · Fayetteville-Manlius | — | Fayetteville-Manlius | 14:47.40 |
| 91 | St. GermainPlace 91 · Middle Country | — | Middle Country | 14:54.10 |
