| 1 | Steven TerrisPlace 1 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 10:34.9 |
| 2 | Alex TuckerPlace 2 · Grade 9 · Westview | 9 | Westview | 11:18.5 |
| 3 | Jake CooperPlace 3 · Grade 10 · San Pasqual | 10 | San Pasqual | 11:22.5 |
| 4 | Connor CavassaPlace 4 · Grade 9 · San Pasqual | 9 | San Pasqual | 11:23.0 |
| 5 | Noah DiamantPlace 5 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 11:24.0 |
| 6 | Joseph TaylorPlace 6 · Grade 9 · Mt Carmel | 9 | Mt Carmel | 11:25.2 |
| 7 | Robert GonzalezPlace 7 · Grade 9 · Helix | 9 | Helix | 11:33.4 |
| 8 | Connor KozloffPlace 8 · Grade 9 · Paloma Valley | 9 | Paloma Valley | 11:37.6 |
| 9 | Brendan AbutinPlace 9 · Grade 9 · Mt Carmel | 9 | Mt Carmel | 11:38.0 |
| 10 | Sam RobinsonPlace 10 · Grade 9 · Mt Carmel | 9 | Mt Carmel | 11:38.6 |
| 11 | Austin WoodPlace 11 · Grade 9 · Cathedral Catholic | 9 | Cathedral Catholic | 11:39.5 |
| 12 | Evan PhibbsPlace 12 · Grade 10 · San Pasqual | 10 | San Pasqual | 11:42.2 |
| 13 | Evan MisuracaPlace 13 · Grade 9 · Westview | 9 | Westview | 11:50.1 |
| 14 | Eric LawverPlace 14 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 11:50.6 |
| 15 | Andrew AguilarPlace 15 · Grade 9 · Helix | 9 | Helix | 11:55.5 |
| 16 | Eric PachonPlace 16 · Grade 9 · Paloma Valley | 9 | Paloma Valley | 11:57.1 |
| 17 | Matt GamberalePlace 17 · Grade 9 · Rancho Bernardo | 9 | Rancho Bernardo | 11:58.7 |
| 18 | Garrett DeLongPlace 18 · Grade 9 · Mt Carmel | 9 | Mt Carmel | 12:04.0 |
| 19 | Ryan BoydPlace 19 · Grade 9 · Mt Carmel | 9 | Mt Carmel | 12:06.4 |
| 20 | Lucas KassmanPlace 20 · Grade 9 · Cathedral Catholic | 9 | Cathedral Catholic | 12:06.6 |
| 21 | Antonio EnriquezPlace 21 · Grade 9 · El Camino | 9 | El Camino | 12:07.1 |
| 22 | Zhouhao YuPlace 22 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 12:08.8 |
| 23 | Josh HumphreysPlace 23 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 12:09.1 |
| 24 | Jeff MakingsPlace 24 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 12:09.8 |
| 25 | Andrew DoweyPlace 25 · Grade 9 · El Camino | 9 | El Camino | 12:11.1 |
| 26 | Matthew HernandezPlace 26 · Grade 10 · Paloma Valley | 10 | Paloma Valley | 12:15.7 |
| 27 | Ryan PowersPlace 27 · Grade 9 · Westview | 9 | Westview | 12:17.6 |
| 28 | Alex Luz-Place 28 · Grade 10 · San Pasqual | 10 | San Pasqual | 12:21.4 |
| 29 | Marc VinluanPlace 29 · Grade 10 · Paloma Valley | 10 | Paloma Valley | 12:23.5 |
| 30 | Kevin YehPlace 30 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 12:25.4 |
| 31 | Raymond BoffmanPlace 31 · Grade 9 · Cathedral Catholic | 9 | Cathedral Catholic | 12:30.0 |
| 32 | Kienan BuiPlace 32 · Grade 9 · Cathedral Catholic | 9 | Cathedral Catholic | 12:35.1 |
| 33 | Michael RunningPlace 33 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 12:36.8 |
| 34 | Nick AtchisonPlace 34 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 12:38.2 |
| 35 | Rafael FloresPlace 35 · Grade 9 · San Pasqual | 9 | San Pasqual | 12:39.4 |
| 36 | Connor McCarthyPlace 36 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 12:43.7 |
| 37 | Josh BirchallPlace 37 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 12:44.6 |
| 38 | Jacob WahlPlace 38 · Grade 9 · Rancho Bernardo | 9 | Rancho Bernardo | 12:44.8 |
| 39 | Grant HicockPlace 39 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 12:45.3 |
| 40 | Brendan ClementPlace 40 · Grade 9 · Mt Carmel | 9 | Mt Carmel | 12:45.5 |
| 41 | Ken DownsPlace 41 · Grade 10 · La Costa Canyon | 10 | La Costa Canyon | 12:45.7 |
| 42 | Tyler GonzalezPlace 42 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 12:46.2 |
| 43 | Spencer DennisPlace 43 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 12:46.9 |
| 44 | Axel KentPlace 44 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 12:47.5 |
| 45 | Eric SmithPlace 45 · Grade 9 · Mt Carmel | 9 | Mt Carmel | 12:49.6 |
| 46 | Drew ChristoffersonPlace 46 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 13:02.1 |
| 47 | Dominique MelchorPlace 47 · Grade 10 · Paloma Valley | 10 | Paloma Valley | 13:02.4 |
| 48 | Sean VasquezPlace 48 · Grade 10 · La Costa Canyon | 10 | La Costa Canyon | 13:02.7 |
| 49 | Nicholas NoelPlace 49 · Grade 9 · Westview | 9 | Westview | 13:04.6 |
| 50 | Sathya RameshPlace 50 · Grade 10 · Rancho Bernardo | 10 | Rancho Bernardo | 13:05.4 |
| 51 | Hayden McDougallPlace 51 · Grade 10 · La Costa Canyon | 10 | La Costa Canyon | 13:10.9 |
| 52 | Gilbert PelayoPlace 52 · Grade 9 · Helix | 9 | Helix | 13:11.6 |
| 53 | Matt PluegerPlace 53 · Grade 10 · Mt Carmel | 10 | Mt Carmel | 13:13.6 |
| 54 | Cabot Van TilPlace 54 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 13:14.3 |
| 55 | John FuPlace 55 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 13:21.7 |
| 56 | Stephen RosenfeldPlace 56 · Grade 9 · Westview | 9 | Westview | 13:22.6 |
| 57 | Andy AskewPlace 57 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 13:23.7 |
| 58 | Adrian JimenezPlace 58 · Grade 9 · Helix | 9 | Helix | 13:26.9 |
| 59 | Mario GasparPlace 59 · Grade 10 · San Pasqual | 10 | San Pasqual | 13:28.3 |
| 60 | Conner JordanPlace 60 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 13:30.1 |
| 61 | Brenner RyanPlace 61 · Grade 9 · Westview | 9 | Westview | 13:30.6 |
| 62 | Arturo SandovalPlace 62 · Grade 9 · Helix | 9 | Helix | 13:31.7 |
| 63 | Xavier MadrigalPlace 63 · Grade 9 · Paloma Valley | 9 | Paloma Valley | 13:33.3 |
| 64 | Tony NguyenPlace 64 · Grade 10 · Patrick Henry | 10 | Patrick Henry | 13:34.0 |
| 65 | Parker BeattyPlace 65 · Grade 12 · Mt Carmel | 12 | Mt Carmel | 13:34.2 |
| 66 | Michael PerezPlace 66 · Grade 9 · Paloma Valley | 9 | Paloma Valley | 13:34.7 |
| 67 | Masing ChandlerPlace 67 · Grade 10 · San Pasqual | 10 | San Pasqual | 13:36.5 |
| 68 | Spencer KatzPlace 68 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 13:36.7 |
| 69 | Jonathan AllenPlace 69 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 13:42.2 |
| 70 | John EdgePlace 70 · Grade 9 · Rancho Bernardo | 9 | Rancho Bernardo | 13:43.2 |
| 71 | Josh MillerPlace 71 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 13:44.7 |
| 72 | Jacob CobbPlace 72 · Grade 9 · Paloma Valley | 9 | Paloma Valley | 13:48.7 |
| 73 | Brandon CooperPlace 73 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 13:53.6 |
| 74 | Paul KangPlace 74 · Grade 9 · Westview | 9 | Westview | 13:58.3 |
| 75 | Vincent OjedaPlace 75 · Grade 9 · Helix | 9 | Helix | 13:59.6 |
| 76 | Connor SheedyPlace 76 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 14:01.0 |
| 77 | Hayden HowellPlace 77 · Grade 10 · San Pasqual | 10 | San Pasqual | 14:04.0 |
| 78 | Noah CallahanPlace 78 · Grade 9 · San Pasqual | 9 | San Pasqual | 14:04.2 |
| 79 | Mason ScottPlace 79 · Grade 10 · La Costa Canyon | 10 | La Costa Canyon | 14:05.1 |
| 80 | Lars HedinPlace 80 · Grade 9 · Helix | 9 | Helix | 14:05.8 |
| 81 | Noah BeeryPlace 81 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 14:13.4 |
| 82 | Wyatt HillPlace 82 · Grade 9 · Rancho Bernardo | 9 | Rancho Bernardo | 14:15.5 |
| 83 | Blake RegottazPlace 83 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 14:17.0 |
| 84 | Steven CappelPlace 84 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 14:19.6 |
| 85 | Jacob LevinePlace 85 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 14:22.5 |
| 86 | Javier MelendezPlace 86 · Grade 9 · Paloma Valley | 9 | Paloma Valley | 14:36.3 |
| 87 | Nick WeisPlace 87 · Grade 10 · Paloma Valley | 10 | Paloma Valley | 14:50.7 |
| 88 | Dylan TullyPlace 88 · Grade 11 · Mt Carmel | 11 | Mt Carmel | 14:57.4 |
| 89 | John SteelePlace 89 · Grade 9 · Cathedral Catholic | 9 | Cathedral Catholic | 15:06.7 |
| 90 | Isan TimalsinaPlace 90 · Grade 9 · Rancho Bernardo | 9 | Rancho Bernardo | 15:07.0 |
| 91 | Michael LeePlace 91 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 15:15.8 |
| 92 | Matthew LopezPlace 92 · Grade 9 · Mt Carmel | 9 | Mt Carmel | 15:25.3 |
| 93 | Blake BookerPlace 93 · Grade 9 · Cathedral Catholic | 9 | Cathedral Catholic | 15:47.2 |
| 94 | Owen StonePlace 94 · Grade 9 · Westview | 9 | Westview | 15:56.8 |
| 95 | Madison AdamsPlace 95 · Grade 9 · La Costa Canyon | 9 | La Costa Canyon | 16:02.1 |
| 96 | Chirac GarqPlace 96 · Grade 9 · Westview | 9 | Westview | 16:25.4 |
| 97 | Alex ScottPlace 97 · Grade 10 · La Costa Canyon | 10 | La Costa Canyon | 16:27.2 |
| 98 | Andrew GartonPlace 98 · Grade 9 · Torrey Pines | 9 | Torrey Pines | 17:45.1 |
| 99 | Hans GankiewiczPlace 99 · Grade 9 · Patrick Henry | 9 | Patrick Henry | 17:51.1 |