| 1 | Samuel BoonePlace 1 · Grade 11 · Mt Carmel | 11 | Mt Carmel | 13:23.3 PR |
| 2 | Simeon PaulPlace 2 · Grade 12 · Mt Carmel | 12 | Mt Carmel | 13:57.0 PR |
| 3 | Senri KuroiwaPlace 3 · Grade 12 · Rancho Bernardo | 12 | Rancho Bernardo | 14:02.3 PR |
| 4 | Fuyuki KuroiwaPlace 4 · Grade 12 · Rancho Bernardo | 12 | Rancho Bernardo | 14:05.4 PR |
| 5 | Jeremy SanchezPlace 5 · Grade 12 · Rancho Bernardo | 12 | Rancho Bernardo | 14:11.2 PR |
| 6 | Samy BelayPlace 6 · Grade 12 · Hoover (SD) | 12 | Hoover (SD) | 14:11.3 PR |
| 7 | Morgan TurpinPlace 7 · Grade 10 · Mt Carmel | 10 | Mt Carmel | 14:22.2 PR |
| 8 | Nickoli MelovidovPlace 8 · Grade 11 · Mt Carmel | 11 | Mt Carmel | 14:27.3 PR |
| 9 | Jose SaldanaPlace 9 · Grade 10 · Valley Center | 10 | Valley Center | 14:28.7 PR |
| 10 | Christopher AllenPlace 10 · Grade 12 · Valley Center | 12 | Valley Center | 14:29.5 PR |
| 11 | Hector NicholsPlace 11 · Grade 11 · Imperial | 11 | Imperial | 14:29.9 PR |
| 12 | Moise MaombiPlace 12 · Grade 11 · Hoover (SD) | 11 | Hoover (SD) | 14:32.5 PR |
| 13 | Rashad PrincePlace 13 · Grade 10 · Orange Glen | 10 | Orange Glen | 14:37.0 PR |
| 14 | Wesley DomsallaPlace 14 · Grade 11 · Rancho Bernardo | 11 | Rancho Bernardo | 14:44.4 PR |
| 15 | Ashtin BrantleyPlace 15 · Grade 11 · Rancho Bernardo | 11 | Rancho Bernardo | 14:46.6 PR |
| 16 | Vincent TranPlace 16 · Grade 11 · Mt Carmel | 11 | Mt Carmel | 14:50.1 PR |
| 17 | Cristian AlcantarPlace 17 · Grade 12 · Chula Vista | 12 | Chula Vista | 14:52.3 PR |
| 18 | Edrey SamanoPlace 18 · Grade 12 · Valley Center | 12 | Valley Center | 14:53.4 PR |
| 19 | Ryan BeattyPlace 19 · Grade 10 · Mt Carmel | 10 | Mt Carmel | 14:58.7 PR |
| 20 | Jacob KeliikoaPlace 20 · Grade 10 · Mt Carmel | 10 | Mt Carmel | 15:05.4 PR |
| 21 | Luke SutherlandPlace 21 · Grade 11 · Marina | 11 | Marina | 15:07.0 PR |
| 22 | Ben SuminskiPlace 22 · Grade 12 · Rancho Bernardo | 12 | Rancho Bernardo | 15:12.7 PR |
| 23 | Jerrod DalupanPlace 23 · Grade 10 · Mt Carmel | 10 | Mt Carmel | 15:13.7 PR |
| 24 | Jose PartidaPlace 24 · Grade 10 · Hoover (SD) | 10 | Hoover (SD) | 15:14.4 PR |
| 25 | Christopher WilliamsPlace 25 · Grade 10 · Mission Vista | 10 | Mission Vista | 15:24.7 PR |
| 26 | Justin FergusonPlace 26 · Grade 10 · Rancho Bernardo | 10 | Rancho Bernardo | 15:30.9 PR |
| 27 | Jose Jaques PayanPlace 27 · Grade 11 · Chula Vista | 11 | Chula Vista | 15:31.8 PR |
| 28 | Eduardo FloresPlace 28 · Grade 11 · Chula Vista | 11 | Chula Vista | 15:33.5 PR |
| 29 | Luis GonzalezPlace 29 · Grade 11 · Valley Center | 11 | Valley Center | 15:34.7 PR |
| 30 | Dylan KasperPlace 30 · Grade 12 · Mission Bay | 12 | Mission Bay | 15:34.9 PR |
| 31 | Joey RobertsPlace 31 · Grade 11 · Rancho Bernardo | 11 | Rancho Bernardo | 15:36.1 PR |
| 32 | Esteban TorresPlace 32 · Grade 12 · Orange Glen | 12 | Orange Glen | 15:36.4 PR |
| 33 | Andrew CulpPlace 33 · Grade 11 · St Augustine | 11 | St Augustine | 15:38.5 PR |
| 34 | Oswaldo GomezPlace 34 · Grade 12 · Hoover (SD) | 12 | Hoover (SD) | 15:39.7 PR |
| 35 | Geoff DeloriePlace 35 · Grade 12 · Marina | 12 | Marina | 15:42.2 PR |
| 36 | Luke GloverPlace 36 · Grade 12 · Marina | 12 | Marina | 15:45.7 PR |
| 37 | Edwin MejiaPlace 37 · Grade 12 · Sweetwater | 12 | Sweetwater | 15:55.3 PR |
| 38 | Gabriel CrosthwaitePlace 38 · Grade 12 · Chula Vista | 12 | Chula Vista | 15:55.3 PR |
| 39 | Cameron PeralesPlace 39 · Grade 11 · Marina | 11 | Marina | 15:56.4 PR |
| 40 | Malik PhillipsPlace 40 · Grade 12 · Imperial | 12 | Imperial | 15:57.2 PR |
| 41 | Bobby SantosPlace 41 · Grade 11 · Rancho Bernardo | 11 | Rancho Bernardo | 15:58.0 PR |
| 42 | Nico NaniPlace 42 · Grade 11 · Mission Vista | 11 | Mission Vista | 15:58.3 PR |
| 43 | Colin DemingPlace 43 · Grade 11 · Mission Vista | 11 | Mission Vista | 15:59.0 PR |
| 44 | Takashi JoubertPlace 44 · Grade 12 · Rancho Bernardo | 12 | Rancho Bernardo | 16:02.1 PR |
| 45 | Jack KaderabekPlace 45 · Grade 9 · St Augustine | 9 | St Augustine | 16:03.8 PR |
| 46 | Alexander ZavalaPlace 46 · Grade 12 · Chula Vista | 12 | Chula Vista | 16:06.5 PR |
| 47 | Dante CovarrubiasPlace 47 · Grade 12 · Chula Vista | 12 | Chula Vista | 16:07.9 PR |
| 48 | Felix TorresPlace 48 · Grade 12 · Chula Vista | 12 | Chula Vista | 16:09.1 PR |
| 49 | Thomas RothPlace 49 · Grade 11 · St Augustine | 11 | St Augustine | 16:09.4 PR |
| 50 | Carter TaffePlace 50 · Grade 10 · Mission Bay | 10 | Mission Bay | 16:09.9 PR |
| 51 | Jackson TeelPlace 51 · Grade 10 · Mission Vista | 10 | Mission Vista | 16:10.5 PR |
| 52 | Brian RodriguezPlace 52 · Grade 12 · Montgomery | 12 | Montgomery | 16:11.2 PR |
| 53 | Jonathan GalvanPlace 53 · Grade 12 · Sweetwater | 12 | Sweetwater | 16:11.3 PR |
| 54 | Miles HairstonPlace 54 · Grade 12 · Mission Vista | 12 | Mission Vista | 16:11.5 PR |
| 55 | Pancho SamanoPlace 55 · Grade 10 · Valley Center | 10 | Valley Center | 16:18.3 PR |
| 56 | Marcus MungorPlace 56 · Grade 10 · Montgomery | 10 | Montgomery | 16:20.7 PR |
| 57 | Diego NavarroPlace 57 · Grade 9 · Escondido Charter | 9 | Escondido Charter | 16:21.5 PR |
| 58 | Jason WattsPlace 58 · Grade 11 · Mission Bay | 11 | Mission Bay | 16:26.1 PR |
| 59 | Grant BeattyPlace 59 · Grade 12 · Mt Carmel | 12 | Mt Carmel | 16:27.2 PR |
| 60 | Andrew TuttlePlace 60 · Grade 11 · Valley Center | 11 | Valley Center | 16:29.1 PR |
| 61 | David AcevesPlace 61 · Grade 12 · Chula Vista | 12 | Chula Vista | 16:33.7 PR |
| 62 | Cristian MartinezPlace 62 · Grade 11 · Orange Glen | 11 | Orange Glen | 16:36.9 PR |
| 63 | Ivan SanchezPlace 63 · Grade 12 · Sweetwater | 12 | Sweetwater | 16:37.0 PR |
| 64 | Adriel TaylorPlace 64 · Grade 9 · Orange Glen | 9 | Orange Glen | 16:40.0 PR |
| 65 | Alejandro GonzalezPlace 65 · Grade 11 · Orange Glen | 11 | Orange Glen | 16:40.7 PR |
| 66 | Anthony FragoPlace 66 · Grade 11 · Escondido Charter | 11 | Escondido Charter | 16:43.3 PR |
| 67 | David VeraPlace 67 · Grade 11 · Orange Glen | 11 | Orange Glen | 16:49.1 PR |
| 68 | Finnegan SneadPlace 68 · Grade 12 · Mission Bay | 12 | Mission Bay | 16:50.5 PR |
| 69 | Sava KramerPlace 69 · Grade 11 · Mission Vista | 11 | Mission Vista | 16:50.7 PR |
| 70 | Aaron GrijalvaPlace 70 · Grade 12 · Imperial | 12 | Imperial | 16:52.7 PR |
| 71 | Parker BramePlace 71 · Grade 9 · Escondido Charter | 9 | Escondido Charter | 16:53.0 PR |
| 72 | Brenden LegaspiPlace 72 · Grade 11 · St Augustine | 11 | St Augustine | 16:53.3 PR |
| 73 | Francisco RomeroPlace 73 · Grade 10 · Sweetwater | 10 | Sweetwater | 16:55.0 PR |
| 74 | German RodiguezPlace 74 · Grade 11 · Imperial | 11 | Imperial | 16:55.6 PR |
| 75 | Jason FisherPlace 75 · Grade 9 · Mission Vista | 9 | Mission Vista | 16:56.7 PR |
| 76 | Joseph ArguelloPlace 76 · Grade 9 · Mission Vista | 9 | Mission Vista | 16:57.0 PR |
| 77 | Jacob CayetanoPlace 77 · Grade 12 · Mission Bay | 12 | Mission Bay | 16:57.5 PR |
| 78 | Riley GrimshawPlace 78 · Grade 11 · Mission Vista | 11 | Mission Vista | 16:57.7 PR |
| 79 | Matthew VollmerPlace 79 · Grade 12 · Sweetwater | 12 | Sweetwater | 16:59.7 PR |
| 80 | Kyle StubbsPlace 80 · Grade 11 · Marina | 11 | Marina | 17:01.3 PR |
| 81 | Chris VanPlace 81 · Grade 10 · Hoover (SD) | 10 | Hoover (SD) | 17:03.5 PR |
| 82 | Evan MartinezPlace 82 · Grade 11 · Mission Bay | 11 | Mission Bay | 17:11.3 PR |
| 83 | Ryan YangPlace 83 · Grade 11 · Arcadia | 11 | Arcadia | 17:13.5 PR |
| 84 | Ari BerriosPlace 84 · Grade 10 · Arcadia | 10 | Arcadia | 17:13.9 PR |
| 85 | Chris BernensPlace 85 · Grade 12 · St Augustine | 12 | St Augustine | 17:31.4 PR |
| 86 | William LeggPlace 86 · Grade 11 · St Augustine | 11 | St Augustine | 17:33.6 PR |
| 87 | Sean PavonePlace 87 · Grade 10 · Mission Bay | 10 | Mission Bay | 17:37.0 PR |
| 88 | Nathan GuoPlace 88 · Grade 11 · Arcadia | 11 | Arcadia | 17:37.9 PR |
| 89 | Jared RobertsPlace 89 · Grade 9 · Escondido Charter | 9 | Escondido Charter | 17:44.2 PR |
| 90 | Nick ArcherPlace 90 · Grade 10 · Mission Bay | 10 | Mission Bay | 17:46.8 PR |
| 91 | Vicente Gonzalez-BarriosPlace 91 · Grade 12 · Mission Bay | 12 | Mission Bay | 17:50.0 PR |
| 92 | Mohammad HalimPlace 92 · Grade 11 · Arcadia | 11 | Arcadia | 17:56.0 PR |
| 93 | Julian GarciaPlace 93 · Grade 9 · Imperial | 9 | Imperial | 18:05.5 PR |
| 94 | Jorge DelgadoPlace 94 · Grade 10 · Montgomery | 10 | Montgomery | 18:31.2 PR |
| 95 | Quentin CoppPlace 95 · Grade 12 · Imperial | 12 | Imperial | 18:33.1 PR |
| 96 | Kevin CervantesPlace 96 · Grade 12 · Montgomery | 12 | Montgomery | 18:59.1 PR |
| 97 | Jordan JiangPlace 97 · Grade 10 · Arcadia | 10 | Arcadia | 18:59.5 PR |
| 98 | Cesar VillaPlace 98 · Grade 11 · Montgomery | 11 | Montgomery | 19:53.4 PR |
| 99 | Joshua BrownePlace 99 · Grade 12 · Christian | 12 | Christian | 19:54.2 PR |
| 100 | Abraham LizarragaPlace 100 · Grade 10 · Montgomery | 10 | Montgomery | 20:13.5 PR |